Journal papers

Journal Articles


V. Nath; K. Schilling; P. Parvathaneni; Y. Huo; A. Hainline et al. : Tractography Reproducibility Challenge With Empirical Data (TraCED): The 2017 ISMRM Diffusion Study Group Challenge; Journal of Magnetic Resonance Imaging. 2019-05-06. DOI : 10.1002/jmri.26794.
B. Bozorgtabar; M. S. Rad; H. K. Ekenel; J.-P. Thiran : Learn to synthesize and synthesize to learn; Computer Vision and Image Understanding. 2019-05-01.
B. Bozorgtabar; D. Mahapatra; H. von Teng; A. Pollinger; L. Ebner et al. : Informative sample generation using class aware generative adversarial networks for classification of chest Xrays; Computer Vision and Image Understanding (CVIU). 2019-04-17.
P. Strom; P. Petersson; M. Rubel; E. Fortuna-Zalesna; A. Widdowson et al. : Analysis of deposited layers with deuterium and impurity elements on samples from the divertor of JET with ITER-like wall; Journal Of Nuclear Materials. 2019-04-01. DOI : 10.1016/j.jnucmat.2018.11.027.
K. D. Lawson; K. M. Aggarwal; I. H. Coffey; F. P. Keenan; M. G. O'Mullane et al. : Population modelling of the He II energy levels in tokamak plasmas: I. Collisional excitation model; Journal Of Physics B-Atomic Molecular And Optical Physics. 2019-02-28. DOI : 10.1088/1361-6455/aaf703.
Y. Hatano; S. E. Lee; J. Likonen; S. Koivuranta; M. Hara et al. : Tritium distributions on W-coated divertor tiles used in the third JET ITER-like wall campaign; Nuclear Materials And Energy. 2019-01-01. DOI : 10.1016/j.nme.2019.01.001.
C. Tuleasca; J. Regis; E. Najdenovska; T. Witjas; N. Girard et al. : Letter: Deep Brain Stimulation of the Pedunculopontine Nucleus Area in Parkinson Disease: Magnetic Resonance Imaging- Based Anatomoclinical Correlations and Optimal Target; Neurosurgery. 2019-01-01. DOI : 10.1093/neuros/nyy516.
G. Bonnier; E. Fischi-Gomez; A. Roche; T. Hilbert; T. Kober et al. : Personalized pathology maps to quantify diffuse and focal brain damage; NeuroImage: Clinical. 2019. DOI : 10.1016/j.nicl.2018.11.017.
E. Annigoni; A. Virtuani; J. Levrat; A. Faes; F. Sculati-Meillaud et al. : Quantifying and modeling the impact of interconnection failures on the electrical performance of crystalline silicon photovoltaic modules; Progress in Photovoltaics: Research and Applications. 2019. DOI : 10.1002/pip.3111.
G. M. Innocenti; T. B. Dyrby; G. Girard; E. St-Onge; J.-P. Thiran et al. : Topological principles and developmental algorithms might refine diffusion tractography; Brain Structure and Function. 2019. DOI : 10.1007/s00429-018-1759-1.
A. G. J. Besson; D. Perdios; Y. Wiaux; J.-P. Thiran : Joint Sparsity with Partially Known Support and Application to Ultrasound Imaging; IEEE Signal Processing Letters. 2019. DOI : 10.1109/LSP.2018.2880571.


P. M. Reis; F. Brau; P. Damman : The mechanics of slender structures; Nature Physics. 2018-12-01. DOI : 10.1038/s41567-018-0369-4.
C. Tuleasca; J. Regis; E. Najdenovska; T. Witjas; N. Girard et al. : Pretherapeutic resting-state fMRI profiles are associated with MR signature volumes after stereotactic radiosurgical thalamotomy for essential tremor; Journal Of Neurosurgery. 2018-12-01. DOI : 10.3171/2018.7.GKS18752.
S. Bagher Salimi; S. Bozorgtabar; P. Schmid-Saugeon; H. Kemal Ekenel; J.-P. Thiran : DermoNet: Densely Linked Convolutional Neural Network for Efficient Skin Lesion Segmentation; EURASIP Journal on Image and Video Processing. 2018-11-23.
T. Megherbi; G. Girard; A. Ghosh; F. Oulebsir-Boumghar; R. Deriche : Fiber orientation distribution function from non-negative sparse recovery with quantitative analysis of local fiber orientations and tractography using DW-MRI datasets; Magnetic Resonance Imaging. 2018-10-13. DOI : 10.1016/j.mri.2018.10.003.
K. G. Schilling; V. Nath; C. Hansen; P. Parvathaneni; J. Blaber et al. : Limits to anatomical accuracy of diffusion tractography using modern approaches; NeuroImage. 2018-10-11. DOI : 10.1016/j.neuroimage.2018.10.029.
G. O. D. Rensonnet; B. Scherrer; G. Girard; A. Jankovski; S. K. Warfield et al. : Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations; Neuroimage. 2018-09-30. DOI : 10.1016/j.neuroimage.2018.09.076.
E. J. Canales-Rodríguez; J. H. Legarreta; M. Pizzolato; G. Rensonnet; G. Girard et al. : Sparse wars: A survey and comparative study of spherical deconvolution algorithms for diffusion MRI; NeuroImage. 2018-09-05. DOI : 10.1016/j.neuroimage.2018.08.071.
A. G. J. Besson; L. Roquette; D. Perdios; M. M. J.-A. Simeoni; M. Arditi et al. : A Physical Model of Non-stationary Blur in Ultrasound Imaging; IEEE Transactions on Computational Imaging. 2018-02-06.
P. Batistoni; S. Popovichev; A. Cufar; Z. Ghani; L. Giacomelli et al. : 14 MeV calibration of JET neutron detectors-phase 1: calibration and characterization of the neutron source; Nuclear Fusion. 2018-02-01. DOI : 10.1088/1741-4326/aa98f6.
J. Comps; C. Tuleasca; B. Goncalves-Matoso; L. Schiappacasse; M. Marguet et al. : Upfront Gamma Knife surgery for facial nerve schwannomas: retrospective case series analysis and systematic review; ACTA NEUROCHIRURGICA. 2018. DOI : 10.1007/s00701-018-3503-2.
T. Hilbert; D. Nguyen; J. Thiran; G. Krueger; T. Kober et al. : True constructive interference in the steady state (trueCISS); MAGNETIC RESONANCE IN MEDICINE. 2018. DOI : 10.1002/mrm.26836.
A. Bivard; T. Lillicrap; B. Marechal; C. Garcia-Esperon; E. Holliday et al. : Transient Ischemic Attack Results in Delayed Brain Atrophy and Cognitive Decline; STROKE. 2018. DOI : 10.1161/STROKEAHA.117.019276.
D. Starnoni; R. Daniel; C. Tuleasca; M. George; M. Levivier et al. : Systematic review and meta-analysis of the technique of subtotal resection and stereotactic radiosurgery for large vestibular schwannomas: a "nerve-centered" approach; NEUROSURGICAL FOCUS. 2018. DOI : 10.3171/2017.12.FOCUS17669.
M. Bjelogrlic; M. Volery; B. Fuchs; J. Thiran; J. Mosig et al. : Stratified spherical model for microwave imaging of the brain: Analysis and experimental validation of transmitted power; MICROWAVE AND OPTICAL TECHNOLOGY LETTERS. 2018. DOI : 10.1002/mop.31101.
C. Tuleasca; T. Witjas; D. Van de Ville; E. Najdenovska; A. Verger et al. : Right Brodmann area 18 predicts tremor arrest after Vim radiosurgery: a voxel-based morphometry study; ACTA NEUROCHIRURGICA. 2018. DOI : 10.1007/s00701-017-3391-x.
C. Tuleasca; L. Negretti; M. Faouzi; V. Magaddino; T. Gevaert et al. : Radiosurgery in the management of brain metastasis: a retrospective single-center study comparing Gamma Knife and LINAC treatment; JOURNAL OF NEUROSURGERY. 2018. DOI : 10.3171/2016.10.JNS161480.
X. Chen; T. Qian; B. Marechal; G. Zhang; T. Yu et al. : Quantitative volume-based morphometry in focal cortical dysplasia: A pilot study for lesion localization at the individual level; EUROPEAN JOURNAL OF RADIOLOGY. 2018. DOI : 10.1016/j.ejrad.2018.06.019.
C. Tuleasca; E. Najdenovska; J. Regis; T. Witjas; N. Girard et al. : Pretherapeutic functional neuroimaging predicts tremor arrest after thalamotomy; ACTA NEUROLOGICA SCANDINAVICA. 2018. DOI : 10.1111/ane.12891.
M. Fartaria; A. Todea; T. Kober; K. O'brien; G. Krueger et al. : Partial volume-aware assessment of multiple sclerosis lesions; NEUROIMAGE-CLINICAL. 2018. DOI : 10.1016/j.nicl.2018.01.011.
B. Misic; R. Betzel; A. Griffa; M. de Reus; Y. He et al. : Network-Based Asymmetry of the Human Auditory System; CEREBRAL CORTEX. 2018. DOI : 10.1093/cercor/bhy101.
G. Rosenthal; F. Vasa; A. Griffa; P. Hagmann; E. Amico et al. : Mapping higher-order relations between brain structure and function with embedded vector representations of connectomes; Nature Communications. 2018. DOI : 10.1038/s41467-018-04614-w.
V. Saenger; A. Ponce-Alvarez; M. Adhikari; P. Hagmann; G. Deco et al. : Linking Entropy at Rest with the Underlying Structural Connectivity in the Healthy and Lesioned Brain; CEREBRAL CORTEX. 2018. DOI : 10.1093/cercor/bhx176.
F. Braun; M. Proenca; M. Lemay; M. Bertschi; A. Adler et al. : Limitations and challenges of EIT-based monitoring of stroke volume and pulmonary artery pressure; PHYSIOLOGICAL MEASUREMENT. 2018. DOI : 10.1088/1361-6579/aa9828.
A. Metzger; E. Le Bars; J. Deverdun; F. Molino; B. Marechal et al. : Is impaired cerebral vasoreactivity an early marker of cognitive decline in multiple sclerosis patients?; EUROPEAN RADIOLOGY. 2018. DOI : 10.1007/s00330-017-5068-5.
E. Beck; P. Sati; V. Sethi; T. Kober; B. Dewey et al. : Improved Visualization of Cortical Lesions in Multiple Sclerosis Using 7T MP2RAGE; AMERICAN JOURNAL OF NEURORADIOLOGY. 2018. DOI : 10.3174/ajnr.A5534.
P. Borius; C. Tuleasca; X. Muraciole; L. Negretti; L. Schiappacasse et al. : Gamma Knife radiosurgery for glossopharyngeal neuralgia: A study of 21 patients with long-term follow-up; CEPHALALGIA. 2018. DOI : 10.1177/0333102417698961.
R. Matthieu; T. Constantin; M. Philippe; S. Luis; M. Maud et al. : Gamma knife radiosurgery for arteriovenous malformations: general principles and preliminary results in a Swiss cohort; SWISS MEDICAL WEEKLY. 2018. DOI : 10.4414/smw.2018.14602.
M. Gilson; G. Deco; K. Friston; P. Hagmann; D. Mantini et al. : Effective connectivity inferred from fMRI transition dynamics during movie viewing points to a balanced reconfiguration of cortical interactions; NEUROIMAGE. 2018. DOI : 10.1016/j.neuroimage.2017.09.061.
C. Tuleasca; M. Messerer; M. Levivier; R. Daniel : Combined modalities of surgery, radiotherapy, radiosurgery and chemotherapy for invasive pituitary carcinoma; ANNALES D ENDOCRINOLOGIE. 2018. DOI : 10.1016/j.ando.2017.01.003.
C. Tuleasca; E. Najdenovska; J. Regis; T. Witjas; N. Girard et al. : Clinical response to Vim's thalamic stereotactic radiosurgery for essential tremor is associated with distinctive functional connectivity patterns; ACTA NEUROCHIRURGICA. 2018. DOI : 10.1007/s00701-017-3456-x.
L. Alameda; M. Fournier; I. Khadimallah; P. Baumann; M. Cleusix et al. : Childhood Trauma Engages Oxidative Stress, Hippocampus Alterations, And Poorer Clinical Outcome In Early Psychosis Patients; Schizophrenia Bulletin. 2018. DOI : 10.1093/schbul/sby014.061.
F. Braun; M. Proenca; A. Adler; T. Riedel; J. Thiran et al. : Accuracy and reliability of noninvasive stroke volume monitoring via ECG-gated 3D electrical impedance tomography in healthy volunteers; PLOS ONE. 2018. DOI : 10.1371/journal.pone.0191870.
T. Hilbert; T. Sumpf; E. Weiland; J. Frahm; J. Thiran et al. : Accelerated T-2 mapping combining parallel MRI and model-based reconstruction: GRAPPATINI; JOURNAL OF MAGNETIC RESONANCE IMAGING. 2018. DOI : 10.1002/jmri.25972.
C. Tuleasca; M. Levivier : A virtual musician quartet with vestibular schwannoma; LANCET ONCOLOGY. 2018. DOI : 10.3171/2015.8.JNS151624.
A. Moreno-Alcázar; B. Gonzalvo; E. J. Canales Rodriguez; L. Blanco; D. Bachiller et al. : Brain structural changes in the basal ganglia in heavy cannabis users: a VBM study; Frontiers in Psychiatry, section Neuroimaging and Stimulation. 2018. DOI : 10.3389/fpsyt.2018.00175.
K. Xiang-Zhen; 2. a. ENIGMA Consortium; E. J. Canales Rodriguez; F. Clyde : Mapping Cortical Brain Asymmetry in 17,141 Healthy Individuals Worldwide via the ENIGMA Consortium; Proceedings of the National Academy of Sciences. 2018. DOI : 10.1073/pnas.1718418115.


A. Papayannis; A. Argyrouli; A. Bougiatioti; E. Remoundaki; S. Vratolis et al. : From hygroscopic aerosols to cloud droplets: The HygrA-CD campaign in the Athens basin -- An overview; Science of the Total Environment. 2017. DOI : 10.1016/j.scitotenv.2016.09.054.
M. Chamberland; G. Girard; M. Bernier; D. Fortin; M. Descoteaux et al. : On the Origin of Individual Functional Connectivity Variability: The Role of White Matter Architecture; Brain Connectivity. 2017. DOI : 10.1089/brain.2017.0539.
E. St-Onge; A. Daducci; G. Girard; M. Descoteaux : Surface-enhanced tractography (SET); Neuroimage. 2017. DOI : 10.1016/j.neuroimage.2017.12.036.
C. De Saint-Aubin; S. Rosset; S. Schlatter; H. Shea : High-cycle electromechanical aging of dielectric elastomer actuators with carbon-based electrodes; Smart Materials and Structures. 2017. DOI : 10.1088/1361-665X/aa9f45.
G. Perrotta; G. Bonnier; D.-E. Meskaldji; D. Romascano; R. Aydarkhanov et al. : Rivastigmine decreases brain damage in HIV patients with mild cognitive deficits; Annals of Clinical and Translational Neurology. 2017. DOI : 10.1002/acn3.493.
K. H. Maier-Hein; P. F. Neher; J.-C. Houde; M.-A. Côté; E. Garyfallidis et al. : The challenge of mapping the human connectome based on diffusion tractography; Nature Communications. 2017. DOI : 10.1038/s41467-017-01285-x.
C. Tuleasca; T. Witjas; E. Najdenovska; A. Verger; N. Girard et al. : Assessing the clinical outcome of Vim radiosurgery with voxel-based morphometry: visual areas are linked with tremor arrest!; Acta Neurochirurgica. 2017. DOI : 10.1007/s00701-017-3317-7.
G. Girard; A. Daducci; L. Petit; J.-P. Thiran; K. Whittingstall et al. : AxTract: Toward microstructure informed tractography; Human Brain Mapping. 2017. DOI : 10.1002/hbm.23741.
J. Stamenkovic; L. Guerriero; P. Ferrazzoli; C. Notarnicola; F. Greifeneder et al. : Soil Moisture Estimation by SAR in Alpine Fields Using Gaussian Process Regressor Trained by Model Simulations; IEEE Transactions on Geoscience and Remote Sensing. 2017. DOI : 10.1109/Tgrs.2017.2687421.
A. Griffa; B. Ricaud; K. Benzi; X. Bresson; A. Daducci et al. : Transient networks of spatio-temporal connectivity map communication pathways in brain functional systems; Neuroimage. 2017. DOI : 10.1016/j.neuroimage.2017.04.015.
A. G. J. Besson; D. Perdios; F. Martinez; Z. Chen; R. E. Carrillo et al. : Ultrafast ultrasound imaging as an inverse problem: Matrix-free sparse image reconstruction; IEEE Transactions on Ultrasonics Ferroelectrics and Frequency Control. 2017. DOI : 10.1109/TUFFC.2017.2768583.
V. Kartik; R. Carrillo; J.-P. Thiran; Y. Wiaux : A Fourier dimensionality reduction model for big data interferometric imaging; Monthly Notices of the Royal Astronomical Society. 2017. DOI : 10.1093/mnras/stx531.
A. Yuce; H. Gao; G. L. Cuendet; J.-P. Thiran : Action Units and Their Cross-Correlations for Prediction of Cognitive Load during Driving; IEEE Transactions on Affective Computing. 2017. DOI : 10.1109/TAFFC.2016.2584042.
N. M. Arar; H. Gao; J.-P. Thiran : A Regression-based User Calibration Framework for Real-time Gaze Estimation; IEEE Transactions on Circuits and Systems for Video Technology. 2017. DOI : 10.1109/TCSVT.2016.2595322.


E. Muñoz-Moreno; E. Fischi Gomez; D. Batalle; C. Borradori-Tolsa; E. Eixarch et al. : Structural Brain Network Reorganization and Social Cognition Related to Adverse Perinatal Condition from Infancy to Early Adolescence; Frontiers in Neuroscience. 2016-12-08. DOI : 10.3389/fnins.2016.00560.
L. Vasung; C. Lepage; M. Radoš; M. Pletikos; J. Richiardi et al. : Quantitative and qualitative analysis of transient fetal compartments during prenatal human brain development; Frontiers in Neuroanatomy. 2016-02-24. DOI : 10.3389/fnana.2016.00011.
D. J. Jörg; A. C. Oates; F. Jülicher : Sequential pattern formation governed by signaling gradients; Physical Biology. 2016. DOI : 10.1088/1478-3975/13/5/05LT03.
L. Pratley; J. McEwen; M. D'Avezac; R. Carrillo; A. Onose et al. : Robust sparse image reconstruction of radio interferometric observations with PURIFY; Monthly Notices- Royal Astronomical Society. 2016.
G. Christe; L. Redhead; T. Legrand; B. M. Jolles; J. Favre : Multi-segment analysis of spinal kinematics during sit-to-stand in patients with chronic low back pain; Journal Of Biomechanics. 2016. DOI : 10.1016/j.jbiomech.2016.05.015.
M. Zhang; F. Varray; A. G. J. Besson; R. E. Carrillo; M. Viallon et al. : Extension of Fourier-based techniques for ultrafast imaging in ultrasound with diverging waves; IEEE Transactions on Ultrasonics Ferroelectrics and Frequency Control. 2016. DOI : 10.1109/TUFFC.2016.2616300.
R. Carrillo; A. Ramirez; G. Arce; K. Barner; B. Sadler : Robust compressive sensing of sparse signals: A review; EURASIP Journal on Advances in Signal Processing. 2016. DOI : 10.1186/s13634-016-0404-5.
F. Vasa; A. Griffa; E. Scariati; M. Schaer; S. Urben et al. : An affected core drives network integration deficits of the structural connectome in 22q11.2 deletion syndrome; Neuroimage-Clinical. 2016. DOI : 10.1016/j.nicl.2015.11.017.
A. G. J. Besson; M. Zhang; F. Varray; H. Liebgott; D. Friboulet et al. : A sparse reconstruction framework for Fourier-based plane wave imaging; IEEE Transactions on Ultrasonics, Ferroelectrics, and Frequency Control. 2016. DOI : 10.1109/TUFFC.2016.2614996.
A. Daducci; A. Dal Palú; M. Descoteaux; J.-P. Thiran : Microstructure informed tractography: pitfalls and open challenges; Frontiers in Neuroscience. 2016. DOI : 10.3389/fnins.2016.00247.
M. Zucchelli; L. Brusini; A. Méndez; A. Daducci; C. Granziera et al. : What lies beneath? Diffusion EAP-based study of brain tissue microstructure; Medical Image Analysis. 2016. DOI : 10.1016/
R. F. Betzel; A. Avena-Koenigsberger; J. Goni; Y. He; M. A. De Reus et al. : Generative models of the human connectome; Neuroimage. 2016. DOI : 10.1016/j.neuroimage.2015.09.041.
E. Fischi Gomez; E. Muñoz-Moreno; L. Vasung; A. Griffa; C. Borradori-Tolsa et al. : Brain network characterization of high-risk preterm-born school-age children; Neuroimage: Clinical. 2016. DOI : 10.1016/j.nicl.2016.02.001.
A. Onose; R. Carrillo; A. Repetti; J. McEwen; J.-P. Thiran et al. : Scalable splitting algorithms for big-data interferometric imaging in the SKA era; Monthly Notices- Royal Astronomical Society. 2016. DOI : 10.1093/mnras/stw1859.


I. Isgum; M. J.N.L. Benders; B. Avants; M. J. Cardoso; S. J. Counsell et al. : Evaluation of automatic neonatal brain segmentation algorithms: The NeoBrainS12 challenge; Medical Image Analysis. 2015-02. DOI : 10.1016/
E. Fischi-Gomez; L. Vasung; D.-E. Meskaldji; F. Lazeyras; C. Borradori-Tolsa et al. : Structural Brain Connectivity in School-Age Preterm Infants Provides Evidence for Impaired Networks Relevant for Higher Order Cognitive Skills and Social Cognition; Cerebral Cortex. 2015. DOI : 10.1093/cercor/bhu073.
A. Roch; V. Trachsel; M. P. Lutolf : Brief Report: Single-Cell Analysis Reveals Cell Division-Independent Emergence of Megakaryocytes From Phenotypic Hematopoietic Stem Cells; Stem Cells. 2015. DOI : 10.1002/stem.2106.
E. J. Canales-Rodriguez; A. Daducci; S. N. Sotiropoulos; E. Caruyer; S. Aja-Fernandez et al. : Spherical Deconvolution of Multichannel Diffusion MRI Data with Non-Gaussian Noise Models and Spatial Regularization; Plos One. 2015. DOI : 10.1371/journal.pone.0138910.
A. Ponce-Alvarez; B. J. He; P. Hagmann; G. Deco : Task-Driven Activity Reduces the Cortical Activity Space of the Brain: Experiment and Whole-Brain Modeling; Plos Computational Biology. 2015. DOI : 10.1371/journal.pcbi.1004445.
M. Proenca; F. Braun; M. Rapin; J. Sola; A. Adler et al. : Influence of heart motion on cardiac output estimation by means of electrical impedance tomography: a case study; Physiological Measurement. 2015. DOI : 10.1088/0967-3334/36/6/1075.
C. Ciller; S. I. De Zanet; M. B. Rueegsegger; A. Pica; R. Sznitman et al. : Automatic Segmentation of the Eye in 3D Magnetic Resonance Imaging: A Novel Statistical Shape Model for Treatment Planning of Retinoblastoma; International Journal Of Radiation Oncology Biology Physics. 2015. DOI : 10.1016/j.ijrobp.2015.02.056.
G. Bonnier; A. Roche; D. Romascano; S. Simioni; D. E. Meskaldji et al. : Multicontrast MRI Quantification of Focal Inflammation and Degeneration in Multiple Sclerosis; BioMed research international. 2015. DOI : 10.1155/2015/569123.
O. F. Eker; K. Zouaoui Boudjeltia; R. A. Corredor Jerez; E. Le Bars; M. Sanchez et al. : MR derived volumetric flow rate waveforms of internal carotid artery in patients treated for unruptured intracranial aneurysms by flow diversion technique; Journal of Cerebral Blood Flow & Metabolism. 2015. DOI : 10.1038/jcbfm.2015.176.
G. L. Cuendet; P. Schoettker; A. Yuce; M. Sorci; H. Gao et al. : Facial Image Analysis for Fully-Automatic Prediction of Difficult Endotracheal Intubation; IEEE Transactions on Biomedical Engineering Bme. 2015. DOI : 10.1109/TBME.2015.2457032.
S. I. De Zanet; C. Ciller; T. Rudolph; P. Maeder; F. Munier et al. : Landmark Detection for Fusion of Fundus and MRI Toward a Patient-Specific Multimodal Eye Model; Ieee Transactions On Biomedical Engineering. 2015. DOI : 10.1109/Tbme.2014.2359676.
A. Ponce-Alvarez; G. Deco; P. Hagmann; G. L. Romani; D. Mantini et al. : Resting-State Temporal Synchronization Networks Emerge from Connectivity Topology and Heterogeneity; Plos Computational Biology. 2015. DOI : 10.1371/journal.pcbi.1004100.
M. T. Eddy; Y. Su; R. Silvers; L. Andreas; L. Clark et al. : Lipid bilayer-bound conformation of an integral membrane beta barrel protein by multidimensional MAS NMR; Journal of Biomolecular NMR. 2015. DOI : 10.1007/s10858-015-9903-1.
B. Misic; R. F. Betzel; A. Nematzadeh; J. Goñi; A. Griffa et al. : Cooperative and competitive spreading dynamics on the human connectome; Neuron. 2015. DOI : 10.1016/j.neuron.2015.05.035.
M. Adhikari; A. R. Beharelle; A. Griffa; P. Hagmann; A. Solodkin et al. : Computational Modeling of Resting State Activity demonstrates Markers of Normalcy in Children with Pre- or Perinatal Stroke; The Journal of Neuroscience. 2015. DOI : 10.1523/Jneurosci.4560-14.2015.
A. Auría Rasclosa; A. Daducci; J.-P. Thiran; Y. Wiaux : Structured sparsity for spatially coherent fibre orientation estimation in diffusion MRI; Neuroimage. 2015. DOI : 10.1016/j.neuroimage.2015.04.049.
D. P. R. Romascano; D. E. Meskaldji; G. Bonnier; S. Simioni; D. Rotzinger et al. : Multicontrast connectometry: A new tool to assess cerebellum alterations in early relapsing‐remitting multiple sclerosis; Human Brain Mapping. 2015. DOI : 10.1002/hbm.22698.
D. E. Meskaldji; L. Vasung; D. P. R. Romascano; J.-P. Thiran; P. Hagmann et al. : Improved statistical evaluation of group differences in connectomes by screening-filtering strategy with application to study maturation of brain connections between childhood and adolescence; Neuroimage. 2015. DOI : 10.1016/j.neuroimage.2014.11.059.
F. Ringeval; F. Eyben; E. Kroupi; A. Yuce; J.-P. Thiran et al. : Prediction of Asynchronous Dimensional Emotion Ratings from Audiovisual and Physiological Data; Pattern Recognition Letters. 2015. DOI : 10.1016/j.patrec.2014.11.007.
D. Schmitter; A. Roche; B. Maréchal; D. Ribes; A. Abdulkadir et al. : An evaluation of volume-based morphometry for prediction of mild cognitive impairment and Alzheimer's disease; NeuroImage: Clinical. 2015. DOI : 10.1016/j.nicl.2014.11.001.
A. Daducci; E. J. Canales-Rodriguez; H. Zhang; T. B. Dyrby; D. C. Alexander et al. : Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data; Neuroimage. 2015. DOI : 10.1016/j.neuroimage.2014.10.026.
L. Ying-Chia; A. Daducci; D. E. Meskaldji; J.-P. Thiran; P. Michel et al. : Quantitative Analysis of Myelin and Axonal Remodeling in the Uninjured Motor Network After Stroke; Brain Connectivity. 2015. DOI : 10.1089/brain.2014.0245.
A. Griffa; P. S. Baumann; C. Ferrari; K. Q. Do; P. Conus et al. : Characterizing the connectome in schizophrenia with diffusion spectrum imaging; Human Brain Mapping. 2015. DOI : 10.1002/hbm.22633.
L. Cammoun; J.-P. Thiran; A. Griffa; R. Meuli; P. Hagmann et al. : Intrahemispheric cortico-cortical connections of the human auditory cortex; Brain Structure and Function. 2015. DOI : 10.1007/s00429-014-0872-z.
A. Daducci; A. Dal Palú; A. Lemkaddem; J.-P. Thiran : COMMIT: Convex Optimization Modeling for Microstructure Informed Tractography; IEEE Transactions on Medical Imaging. 2015. DOI : 10.1109/TMI.2014.2352414.
A. Monin; P. Baumann; A. Griffa; L. Xin; R. Mekle et al. : Glutathione deficit impairs myelin maturation: relevance for white matter integrity in schizophrenia patients; Molecular Psychiatry. 2015. DOI : 10.1038/mp.2014.88.
L. Polania; R. Carrillo; M. Blanco-Velasco; K. Barner : Exploiting Prior Knowledge in Compressed Sensing Wireless ECG Systems; IEEE Journal of Biomedical and Health Informatics. 2015. DOI : 10.1109/JBHI.2014.2325017.
F. De Morsier; D. Tuia; M. Borgeaud; V. Gass; J.-P. Thiran : Cluster Validity Measure and Merging System for Hierarchical Clustering considering Outliers; Pattern Recognition. 2015. DOI : 10.1016/j.patcog.2014.10.003.


G. Bonnier; A. Roche; D. Romascano; S. Simioni; D. Meskaldji et al. : Advanced MRI unravels the nature of tissue alterations in early multiple sclerosis; Annals of clinical and translational neurology. 2014. DOI : 10.1002/acn3.68.
G. Deco; P. Hagmann; A. G. Hudetz; G. Tononi : Modeling Resting-State Functional Networks When the Cortex Falls Asleep: Local and Global Changes; Cerebral Cortex. 2014. DOI : 10.1093/cercor/bht176.
A. Sirbu; A. Rantamäki; E. J. Saarinen; V. Iakovlev; A. Mereuta et al. : High performance wafer-fused semiconductor disk lasers emitting in the 1300 nm waveband; Optics Express. 2014. DOI : 10.1364/OE.22.029398.
V. Mougel; L. Chatelain; J. Hermle; R. Caciuffo; E. Colineau et al. : A Uranium-Based UO2+-Mn2+ Single-Chain Magnet Assembled trough Cation-Cation Interactions; Angewandte Chemie-International Edition. 2014. DOI : 10.1002/anie.201307366.
A. Lemkaddem; D. H. M. Skiöldebrand; A. Dal Palù; J.-P. Thiran; A. Daducci : Global tractography with embedded anatomical priors for quantitative connectivity analysis; Frontiers in Neurology. 2014. DOI : 10.3389/fneur.2014.00232.
A. Avena-Koenigsberger; J. Goñi; R. F. Betzel; M. P. van den Heuve; A. Griffa et al. : Using Pareto optimality to explore the topology and dynamics of the human connectome; Philosophical Transactions B. 2014. DOI : 10.1098/rstb.2013.0530.
M. P. Cecchini; M. Parnigotto; F. Merigo; P. Marzola; A. Daducci et al. : 3D Printing of Rat Salivary Glands: The Submandibular-Sublingual Complex; Anatomia Histologia Embryologia. 2014. DOI : 10.1111/ahe.12074.
A. Ciurte; X. Bresson; O. Cuisenaire; N. Houhou; S. Nedevschi et al. : Semi-Supervised Segmentation of Ultrasound Images Based on Patch Representation and Continuous Min Cut; Plos One. 2014. DOI : 10.1371/journal.pone.0100972.
S. Simioni; F. Amaru; G. Bonnier; T. Kober; D. Rotzinger et al. : MP2RAGE provides new clinically-compatible correlates of mild cognitive deficits in relapsing-remitting multiple sclerosis; Journal Of Neurology. 2014. DOI : 10.1007/s00415-014-7398-4.
V. Estellers; J.-P. Thiran; M. Gabrani : Surface Reconstruction From Microscopic Images in Optical Lithography; Ieee Transactions On Image Processing. 2014. DOI : 10.1109/Tip.2014.2330791.
A. Lemkaddem; A. Daducci; N. Kunz; F. Lazeyras; M. Seeck et al. : Connectivity and tissue microstructural alterations in right and left temporal lobe epilepsy revealed by diffusion spectrum imaging; NeuroImage: Clinical. 2014. DOI : 10.1016/j.nicl.2014.07.013.
O. Esteban; G. Wollny; S. Gorthi; M.-J. Ledesma-Carbayo; J.-P. Thiran et al. : MBIS: Multivariate Bayesian Image Segmentation tool; Computer Methods And Programs In Biomedicine. 2014. DOI : 10.1016/j.cmpb.2014.03.003.
S. Rueda; S. Fathima; C. L. Knight; M. Yaqub; A. T. Papageorghiou et al. : Evaluation and Comparison of Current Fetal Ultrasound Image Segmentation Methods for Biometric Measurements: A Grand Challenge; Ieee Transactions On Medical Imaging. 2014. DOI : 10.1109/Tmi.2013.2276943.
J. Goni; V. D. Heuvel; P. Martijn; A. Avena-Koenigsberger; D. Mendizabal et al. : Resting-brain functional connectivity predicted by analytic measures of network communication; Proceedings Of The National Academy Of Sciences Of The United States Of America. 2014. DOI : 10.1073/pnas.1315529111.
D. Zosso; X. Bresson; J.-P. Thiran : Fast Geodesic Active Fields for Image Registration Based on Splitting and Augmented Lagrangian Approaches; Ieee Transactions On Image Processing. 2014. DOI : 10.1109/Tip.2013.2253473.
A. Daducci; S. Tambalo; S. Fiorini; F. Osculati; M. Teti et al. : Manganese-enhanced magnetic resonance imaging investigation of the Interferon-α model of depression in rats; Magnetic Resonance Imaging. 2014. DOI : 10.1016/j.mri.2014.02.006.
G. Bonanno; G. Puy; Y. Wiaux; R. van Heeswijk; D. Piccini et al. : Self-Navigation with Compressed Sensing for 2D translational Motion Correction in Free-Breathing Coronary MRI: a Feasibility Study; Plos One. 2014. DOI : 10.1371/journal.pone.0105523.
R. Carrillo; J. McEwen; Y. Wiaux : PURIFY: a new approach to radio-interferometric imaging; Monthly Notices- Royal Astronomical Society. 2014. DOI : 10.1093/mnras/stu202.
A. Auría Rasclosa; R. Carrillo; J.-P. Thiran; Y. Wiaux : Tensor optimisation for optical-interferometric imaging; Monthly Notices of the Royal Astronomical Society. 2014. DOI : 10.1093/mnras/stt1994.
V. Estellers Casas; D. Zosso; X. Bresson; J.-P. Thiran : Harmonic Active Contours; IEEE Transactions on Image Processing. 2014. DOI : 10.1109/Tip.2013.2286326.
A. Daducci; E. J. Canales-Rodríguez; M. Descoteaux; E. Garyfallidis; Y. Gur et al. : Quantitative comparison of reconstruction methods for intra-voxel fiber recovery from diffusion MRI; IEEE Transactions on Medical Imaging. 2014. DOI : 10.1109/Tmi.2013.2285500.
V. Estellers Casas; J.-P. Thiran; M. Gabrani : Surface reconstruction from microscopic images in optical lithography; IEEE Transactions on Image Processing. 2014.
A. Daducci; D. Van De Ville; J.-P. Thiran; Y. Wiaux : Sparse regularization for fiber ODF reconstruction: from the suboptimality of $\ell_2$ and $\ell_1$ priors to $\ell_0$; Medical Image Analysis. 2014. DOI : 10.1016/


Y. Assaf; D. C. Alexander; D. K. Jones; A. Bizzi; T. E. Behrens et al. : The CONNECT project: Combining macro- and micro-structure; NeuroImage. 2013-10-15. DOI : 10.1016/j.neuroimage.2013.05.055.
D. E. Meskaldji; E. Fischi-Gomez; A. Griffa; P. Hagmann; S. Morgenthaler et al. : Comparing connectomes across subjects and populations at different scales; NeuroImage. 2013-04-28. DOI : 10.1016/j.neuroimage.2013.04.084.
M. Violay; S. Nielsen; E. Spagnuolo; D. Cinti; G. Di Toro et al. : Pore fluid in experimental calcite-bearing faults: Abrupt weakening and geochemical signature of co-seismic processes; Earth and Planetary Science Letters. 2013. DOI : 10.1016/j.epsl.2012.11.021.
J. Cruz; M. Bierlaire; J.-P. Thiran : Sample and Pixel Weighting Strategies for Robust Incremental Visual Tracking; IEEE Transactions on Circuits and Systems for Video Technology. 2013. DOI : 10.1109/TCSVT.2013.2249374.
R. Carrillo; K. Barner : Lorentzian Iterative Hard Thresholding: Robust Compressed Sensing With Prior Information; IEEE Transactions on Signal Processing. 2013. DOI : 10.1109/Tsp.2013.2274275.
A. Daducci; C. Granziera; S. Simioni; M. Cavassini; A. Roche et al. : Micro-Structural Brain Alterations in Aviremic HIV+ Patients with Minor Neurocognitive Disorders: A Multi-Contrast Study at High Field; Plos One. 2013. DOI : 10.1371/journal.pone.0072547.
G. Deco; A. Ponce-Alvarez; D. Mantini; G. L. Romani; P. Hagmann et al. : Resting-State Functional Connectivity Emerges from Structurally and Dynamically Shaped Slow Linear Fluctuations; Journal Of Neuroscience. 2013. DOI : 10.1523/Jneurosci.1091-13.2013.
M.-C. Ottet; M. Schaer; M. Debbane; L. Cammoun; J.-P. Thiran et al. : Graph theory reveals dysconnected hubs in 22q11DS and altered nodal efficiency in patients with hallucinations; Frontiers In Human Neuroscience. 2013. DOI : 10.3389/fnhum.2013.00402.
S. Gorthi; M. Bach Cuadra; P.-A. Tercier; A. S. Allal; J.-P. Thiran : Weighted Shape-Based Averaging With Neighborhood Prior Model for Multiple Atlas Fusion-Based Medical Image Segmentation; IEEE Signal Processing Letters. 2013. DOI : 10.1109/LSP.2013.2279269.
J.-L. Durrieu; J.-P. Thiran : Source/Filter Factorial Hidden Markov Model, with Application to Pitch and Formant Tracking; IEEE Transactions on Audio Speech and Language Processing. 2013. DOI : 10.1109/TASL.2013.2277941.
L. Wolz; J. McEwen; F. Abdalla; R. Carrillo; Y. Wiaux : Revisiting the spread spectrum effect in radio interferometric imaging: a sparse variant of the w-projection algorithm; Monthly Notices- Royal Astronomical Society. 2013. DOI : 10.1093/mnras/stt1707.
A. Barre; J.-P. Thiran; B. Jolles; N. Theumann; K. Aminian : Soft tissue artifact assessment during treadmill walking in subjects with total knee arthroplasty; IEEE transactions on bio-medical engineering. 2013. DOI : 10.1109/TBME.2013.2268938.
A. Buttu; E. Pruvot; J. Van Zaen; A. Viso; A. Forclaz et al. : Adaptive frequency tracking of the baseline ECG identifies the site of atrial fibrillation termination by catheter ablation; Biomedical Signal Processing And Control. 2013. DOI : 10.1016/j.bspc.2013.02.005.
A. Griffa; P. Baumann; J.-P. Thiran; P. Hagmann : Structural connectomics in brain diseases; Neuroimage. 2013. DOI : 10.1016/j.neuroimage.2013.04.056.
C. Granziera; D. Romascano; A. Daducci; A. Roche; M. Vincent et al. : Migraineurs without aura show microstructural abnormalities in the cerebellum and frontal lobe; The Cerebellum. 2013. DOI : 10.1007/s12311-013-0491-x.
K. O'Brien; A. Daducci; N. Kickler; F. Lazeyras; R. Gruetter et al. : 3D Residual Eddy Current Field Characterisation: applied to Diffusion Weighted Magnetic Resonance Imaging; IEEE Transactions on Medical Imaging. 2013. DOI : 10.1109/TMI.2013.2259249.
R. F. Betzel; A. Griffa; A. Avena-Koenigsberger; J. Goni; P. Hagmann et al. : Multi-scale community organization of the human structural connectome and its relationship with resting-state functional connectivity; Network Science. 2013. DOI : 10.1017/nws.2013.19.
M.-C. Ottet; M. Schaer; L. Cammoun; M. scheider; M. Debbané et al. : Reduced Fronto-Temporal and Limbic Connectivity in the 22q11.2 Deletion Syndrome: Vulnerability Markers for Developing Schizophrenia?; Plos One. 2013. DOI : 10.1371/journal.pone.0058429.
A. Lascano; A. Lemkaddem; C. Granziera; C. Korff; C. Boex et al. : Tracking the source of cerebellar epilepsy: Hemifacial seizures associated with cerebellar cortical dysplasia; Epilepsy Research. 2013. DOI : 10.1016/j.eplepsyres.2012.12.010.
V. Estellers Casas; J.-P. Thiran; X. Bresson : Enhanced Compressed Sensing Recovery with Level Set Normals; IEEE Transactions in Image Processing. 2013. DOI : 10.1109/Tip.2013.2253484.
B. Leistedt; J. McEwen; P. Vandergheynst; Y. Wiaux : S2LET: A code to perform fast wavelet analysis on the sphere; Astronomy and Astrophysics. 2013. DOI : 10.1051/0004-6361/201220729.
C. Granziera; A. Daducci; D. Romascano; A. Roche; G. Helms et al. : Structural abnormalities in the thalamus of migraineurs with aura: a multiparametric study at 3T; Human Brain Mapping. 2013. DOI : 10.1002/hbm.22266.
R. Carrillo; J. McEwen; D. Van De Ville; J.-P. Thiran; Y. Wiaux : Sparsity Averaging for Compressive Imaging; IEEE Signal Processing Letters. 2013. DOI : 10.1109/LSP.2013.2259813.
Z. Khalid; R. A. Kennedy; S. Durrani; P. Sadeghi; Y. Wiaux et al. : Fast Directional Spatially Localized Spherical Harmonic Transform; IEEE Transactions on Signal Processing. 2013. DOI : 10.1109/Tsp.2013.2247601.
S. Arberet; P. Vandergheynst; R. Carrillo; J.-P. Thiran; Y. Wiaux : Sparse Reverberant Audio Source Separation via Reweighted Analysis; IEEE Transactions on Audio Speech and Language Processing. 2013. DOI : 10.1109/Tasl.2013.2250962.
X. Gigandet; A. Griffa; T. Kober; A. Daducci; G. Gilbert et al. : A Connectome-Based Comparison of Diffusion MRI Schemes; Plos One. 2013. DOI : 10.1371/journal.pone.0075061.
F. de Morsier; D. Tuia; M. Borgeaud; V. Gass; J.-P. Thiran : Semi-Supervised Novelty Detection using SVM entire solution path; IEEE Transactions on Geoscience and Remote Sensing. 2013. DOI : 10.1109/TGRS.2012.2236683.
J. McEwen; G. Puy; J.-P. Thiran; P. Vandergheynst; D. Van De Ville et al. : Sparse image reconstruction on the sphere: implications of a new sampling theorem; IEEE Transactions on Image Processing. 2013. DOI : 10.1109/TIP.2013.2249079.


L. Vasung; E. Fischi-Gomez; P. S. Hüppi : Multimodality evaluation of the pediatric brain: DTI and its competitors; Pediatric Radiology. 2012-08-29. DOI : 10.1007/s00247-012-2515-y.
T. Leidi; G. Scocchi; L. Grossi; S. Pusterla; C. D'Angelo et al. : Computing effective properties of random heterogeneous materials on heterogeneous parallel processors; Computer Physics Communications. 2012. DOI : 10.1016/j.cpc.2012.06.010.
A. Daducci; S. Gerhard; A. Griffa; A. Lemkaddem; L. Cammoun et al. : The Connectome Mapper: an open-source processing pipeline to map connectomes with MRI; PLoS ONE. 2012. DOI : 10.1371/journal.pone.0048121.
E. J. L. Brunenberg; P. Moeskops; W. H. Backes; C. Pollo; L. Cammoun et al. : Structural and Resting State Functional Connectivity of the Subthalamic Nucleus: Identification of Motor STN Parts and the Hyperdirect Pathway; Plos One. 2012. DOI : 10.1371/journal.pone.0039061.
R. Carrillo; J. McEwen; Y. Wiaux : Sparsity Averaging Reweighted Analysis (SARA): a novel algorithm for radio-interferometric imaging; Monthly Notices- Royal Astronomical Society. 2012. DOI : 10.1111/j.1365-2966.2012.21605.x.
M. RUEEGSEGGER; M. Bach Cuadra; A. Pica; C. AMSTUTZ; T. RUDOLPH et al. : STATISTICAL MODELING OF THE EYE FOR MULTIMODAL TREATMENT PLANNING FOR EXTERNAL BEAM RADIOTHERAPY OF INTRAOCULAR TUMORS; International Journal of Radiation Oncology, Biology, Physics.. 2012. DOI : 10.1016/j.ijrobp.2012.05.040.
A. Lemkaddem; A. Daducci; S. Vulliemoz; K. O'Brien; F. Lazeyras et al. : A multi-center study: Intra-scan and inter-scan variability of Diffusion Spectrum Imaging; Neuroimage. 2012. DOI : 10.1016/j.neuroimage.2012.04.045.
C. Granziera; A. Daducci; D. E. Meskaldji; A. Roche; P. Maeder et al. : A new early and automated MRI-based predictor of motor improvement after stroke; Neurology. 2012. DOI : 10.1212/WNL.0b013e31825f25e7.
V. Estellers Casas; J.-P. Thiran : Multi-pose lipreading and audio-visual speech recognition; EURASIP Journal on Advances in Signal Processing. 2012. DOI : 10.1186/1687-6180-2012-51.
M. Schaer; M. Bach Cuadra; N. Schmansky; B. Fischl; J.-P. Thiran et al. : How to Measure Cortical Folding from MR Images: a Step-by-Step Tutorial to Compute Local Gyrification Index; Journal of Visualized Experiments. 2012. DOI : 10.3791/3417.
J. Cruz; I. Bogdanova; B. Paquier; M. Bierlaire; J.-P. Thiran : Scale Invariant Feature Transform on the Sphere: Theory and Applications; International Journal of Computer Vision. 2012. DOI : 10.1007/s11263-011-0505-4.
V. Estellers Casas; D. Zosso; R. Lai; S. Osher; J.-P. Thiran et al. : An Efficient Algorithm for Level Set Method Preserving Distance Function; IEEE Transactions on Image Processing. 2012. DOI : 10.1109/TIP.2012.2202674.
L. Cammoun; X. Gigandet; D. E. Meskaldji; J.-P. Thiran; O. Sporns et al. : Mapping the human connectome at multiple scales with diffusion spectrum MRI; Journal of Neuroscience Methods. 2012. DOI : 10.1016/j.jneumeth.2011.09.031.
V. Estellers Casas; M. Gurban; J.-P. Thiran : On dynamic stream weighting for Audio-Visual Speech Recognition; Transactions on Audio, Speech, and Language Processing. 2012. DOI : 10.1109/TASL.2011.2172427.
P. Baumann; L. Cammoun; P. Conus; K. Do Q.; P. Marquet et al. : High b-value diffusion-weighted imaging: a sensitive method to reveal white matter differences in schizophrenia; Psychiatry Research -Neuroimaging-. 2012. DOI : 10.1016/j.pscychresns.2011.08.003.
G. Krueger; C. Granziera; C. R. Jack; J. L. Gunter; A. Littmann et al. : Effects of MRI scan acceleration on brain volume measurement consistency; Journal of magnetic resonance imaging : JMRI. 2012. DOI : 10.1002/jmri.23694.
G. Puy; P. Vandergheynst; R. Gribonval; Y. Wiaux : Universal and efficient compressed sensing by spread spectrum and application to realistic Fourier imaging techniques; EURASIP Journal on Advances in Signal Processing. 2012. DOI : 10.1186/1687-6180-2012-6.
G. Puy; J. Marques; R. Gruetter; J.-P. Thiran; D. Van De Ville et al. : Spread spectrum magnetic resonance imaging; IEEE Transactions on Medical Imaging. 2012. DOI : 10.1109/TMI.2011.2173698.
A. Daducci; A. Marigonda; G. Orlandi; R. Posenato : Neuronal Fiber--tracking via optimal mass transportation; Communications on Pure and Applied Analysis (CPAA). 2012. DOI : 10.3934/cpaa.2012.11.2157.


M. Moya; S. Madronich; A. Retama; R. Weber; K. Baumann et al. : Identification of chemistry-dependent artifacts on gravimetric PM fine readings at the T1 site during the MILAGRO field campaign; Atmospheric Environment. 2011. DOI : 10.1016/j.atmosenv.2010.08.059.
G. Brunetti; D. Robert; P. Bayle-Guillemaud; J. Rouvière; E. Rauch et al. : Confirmation of the domino-cascade model by lifepo4/fepo 4 precession electron diffraction; Chemistry of Materials. 2011. DOI : 10.1021/cm201783z.
W. M. Solomon; K. H. Burrell; J. S. Degrassie; J. A. Boedo; A. M. Garofalo et al. : Characterization of intrinsic rotation drive on DIII-D; Nuclear Fusion. 2011. DOI : 10.1088/0029-5515/51/7/073010.
D. E. Meskaldji; J.-P. Thiran; S. Morgenthaler : A comprehensive error rate for multiple testing; Arxiv preprint. 2011.
A. Kunze; A. Valero; D. Zosso; P. Renaud : Synergistic NGF/B27 Gradients Position Synapses Heterogeneously in 3D Micropatterned Neural Cultures; PLoS ONE. 2011. DOI : 10.1371/journal.pone.0026187.
J.-L. Durrieu; B. David; G. Richard : A Musically Motivated Mid-Level Representation for Pitch Estimation and Musical Audio Source Separation; IEEE Journal of Selected Topics in Signal Processing. 2011. DOI : 10.1109/JSTSP.2011.2158801.
P. Revuelta Sanz; B. Ruiz Mezcua; S. Pena; M. José; J.-P. Thiran : Segment-Based Real-Time Stereo Vision Matching using Characteristics Vectors; The Journal of Imaging Science and Technology. 2011. DOI : 10.2352/J.ImagingSci.Technol.2011.55.5.050201.
D. E. Meskaldji; M.-C. Ottet; L. Cammoun; P. Hagmann; R. Meuli et al. : Adaptive Strategy for the Statistical Analysis of Connectomes; Plos One. 2011. DOI : 10.1371/journal.pone.0023009.
S. Gerhard; A. Daducci; A. Lemkaddem; R. Meuli; J.-P. Thiran et al. : The Connectome Viewer Toolkit: an open source framework to manage, analyze, and visualize connectomes; Frontiers in neuroinformatics. 2011. DOI : 10.3389/fninf.2011.00003.
P. Farace; S. Tambalo; S. Fiorini; F. Merigo; A. Daducci et al. : Early versus late GD-DTPA MRI enhancement in experimental glioblastomas; Journal of Magnetic Resonance Imaging. 2011.
A. Roche; D. Ribes; M. Bach Cuadra; G. Krüger : On the Convergence of EM-Like Algorithms for Image Segmentation using Markov Random Fields; Medical Image Analysis -Elsevier-. 2011. DOI : 10.1016/
G. Puy; P. Vandergheynst; Y. Wiaux : On Variable Density Compressive Sampling; IEEE Signal Processing Letters. 2011. DOI : 10.1109/LSP.2011.2163712.
D. Ribes; J. Parafita; R. Charrier; F. Magara; P. Magistretti et al. : JULIDE: a software tool for 3D reconstruction and statistical analysis of autoradiographic mouse brain sections; Plos One. 2011. DOI : 10.1371/journal.pone.0014094.
J. McEwen; Y. Wiaux; D. Eyers : Data compression on the sphere; Journal of Astrophysics and Astronomy. 2011. DOI : 10.1051/0004-6361/201015728.
J. McEwen; Y. Wiaux : A novel sampling theorem on the sphere; IEEE Transactions on Signal Processing. 2011. DOI : 10.1109/TSP.2011.2166394.
B. Mortamet; M. Bernstein; C. Jack; J.-P. Thiran; G. Krueger : Multi-slice 2D MR imaging: automatic assessment of image quality; Journal of Magnetic Resonance Imaging. 2011.
A. Abdulkadir; B. Mortamet; G. Krueger; P. Vemuri; C. Jack et al. : Effects of hardware heterogeneity on the performance of SVM Alzheimer's disease classifier; Neuroimage. 2011. DOI : 10.1016/j.neuroimage.2011.06.029.
M. Cabezas Grebol; A. Oliver; X. Llado; J. Freixenet; M. Bach Cuadra : Review on Atlas-based Segmentation of Magnetic Resonance Brain Images; Computer Methods and Programs in Biomedicine. 2011. DOI : 10.1016/j.cmpb.2011.07.015.
J. McEwen; Y. Wiaux : Compressed sensing for wide-field radio interferometric imaging; Monthly Notices- Royal Astronomical Society. 2011. DOI : 10.1111/j.1365-2966.2011.18217.x.
P. Farace; F. Merigo; S. Fiorini; E. Nicolato; S. Tambalo et al. : DCE-MRI using small-molecular and albumin-binding contrast agents in experimental carcinomas with different stromal content; European journal of radiology. 2011. DOI : 10.1016/j.ejrad.2009.04.043.
D. Zosso; X. Bresson; J.-P. Thiran : Geodesic Active Fields - A Geometric Framework for Image Registration; IEEE Transactions on Image Processing. 2011. DOI : 10.1109/TIP.2010.2093904.
S. Gorthi; V. Duay; X. Bresson; M. Bach Cuadra; S. Castro et al. : Active Deformation Fields: Dense Deformation Field Estimation for Atlas-based Segmentation using the Active Contour Framework; Medical Image Analysis. 2011. DOI : 10.1016/


M. Pregelj; A. Zorko; O. Zaharko; Z. Kutnjak; M. Jagodic et al. : Magnetic phase diagram of the multiferroic FeTe2O5Br; Physical Review B. 2010. DOI : 10.1103/PhysRevB.82.144438.
M. Schaer; B. Glaser; M.-C. Ottet; M. Schneider; M. Bach Cuadra et al. : Regional cortical volumes and congenital heart disease: a MRI study in 22q11.2 deletion syndrome; Journal of Neurodevelopmental Disorders. 2010. DOI : 10.1007/s11689-010-9061-4.
P. Hagmann; O. Sporns; N. Madan; L. Cammoun; R. Pienaar et al. : White matter maturation reshapes structural connectivity in the late developing human brain; Proceedings- National Academy of Sciences Usa. 2010. DOI : 10.1073/pnas.1009073107.
J. Meynet; J.-P. Thiran : Information theoretic combination of pattern classifiers; Pattern Recognition. 2010. DOI : 10.1016/j.patcog.2010.04.013.
G. Walckiers; B. Fuchs; J.-P. Thiran; J. R. Mosig; C. Pollo : Influence of the implanted pulse generator as reference electrode in finite element model of monopolar deep brain stimulation; Journal of Neuroscience Methods. 2010. DOI : 10.1016/j.jneumeth.2009.10.012.
P. Hagmann; L. Cammoun; X. Gigandet; S. Gerhard; P. E. Grant et al. : MR connectomics: Principles and challenges; Journal of Neuroscience Methods. 2010. DOI : 10.1016/j.jneumeth.2010.01.014.


A. Asa-Awuku; G. J. Engelhart; B. H. Lee; S. N. Pandis; A. Nenes : Relating CCN activity, volatility, and droplet growth kinetics of β-caryophyllene secondary organic aerosol; Atmospheric Chemistry and Physics. 2009. DOI : 10.5194/acp-9-795-2009.
S. A. Knock; A. R. McIntosh; O. Sporns; R. Koetter; P. Hagmann et al. : The effects of physiologically plausible connectivity structure on local and global dynamics in large scale brain models; Journal Of Neuroscience Methods. 2009. DOI : 10.1016/j.jneumeth.2009.07.007.
P. Farace; M. Galiè; F. Merigo; A. Daducci; L. Calderan et al. : Inhibition of tyrosine kinase receptors by SU6668 promotes abnormal stromal development at the periphery of carcinomas; British journal of cancer. 2009. DOI : 10.1038/sj.bjc.6605041.
U. Castellani; M. Cristiani; A. Daducci; P. Farace; P. Marzola et al. : DCE-MRI data analysis for cancer area classification; Methods of information in medicine. 2009. DOI : 10.3414/ME9224.
S. Tambalo; A. Daducci; S. Fiorini; F. Boschi; M. Mariani et al. : Experimental protocol for activation-induced manganese-enhanced MRI (AIM-MRI) based on quantitative determination of Mn content in rat brain by fast T1 mapping; Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine. 2009. DOI : 10.1002/mrm.22095.
M. Schaer; M. Debbané; M. Bach Cuadra; M.-C. Ottet; B. Glaser et al. : Deviant trajectories of cortical maturation in 22q11.2 deletion syndrome (22q11DS): A cross-sectional and longitudinal study; Schizophrenia Research. 2009. DOI : 10.1016/j.schres.2009.09.016.
M. Gurban; J.-P. Thiran : Information theoretic feature extraction for audio-visual speech recognition; IEEE Transactions on Signal Processing. 2009. DOI : 10.1109/TSP.2009.2026513.
M. Schaer; B. Glaser; M. Bach Cuadra; M. Debbane; J.-P. Thiran et al. : Congenital heart disease affects local gyrification in 22q11.2 deletion syndrome; Developmental Medicine and Child Neurology. 2009. DOI : 10.1111/j.1469-8749.2009.03281.x.
N. Houhou; J.-P. Thiran; X. Bresson : Fast Texture Segmentation Based on Semi-local Region Descriptor and Active Contour; Numerical Mathematics: Theory , Methods and Applications.. 2009. DOI : 10.4208/nmtma.2009.m9007s.
B. Mortamet; M. A. Bernstein; C. R. Jack Jr.; J. L. Gunter; C. Ward et al. : Automatic quality assessment in structural brain magnetic resonance imaging; Magnetic Resonance in Medicine. 2009. DOI : 10.1002/mrm.21992.
J. Alstott; M. Breakspear; P. Hagmann; L. Cammoun; O. Sporns : Modeling the Impact of Lesions in the Human Brain; PLoS computational Biology. 2009. DOI : 10.1371/journal.pcbi.1000408.
D. Viceic; R. Campos; E. Fornari; L. Spierer; R. Meuli et al. : Local landmark-based registration for fMRI group studies of nonprimary auditory cortex; Neuroimage. 2009. DOI : 10.1016/j.neuroimage.2008.07.051.
D. Zosso; J.-P. Thiran : A Scale-Space of Cortical Feature Maps; IEEE Signal Processing Letters. 2009. DOI : 10.1109/LSP.2009.2026195.
S. Gorthi; M. Bach Cuadra; J.-P. Thiran : Exporting Contours to DICOM-RT Structure Set; Insight Journal. 2009.
R. Martuzzi; M. M. Murray; R. A. Meuli; J.-P. Thiran; P. P. Maeder et al. : Methods for Determining Frequency- and Region-Dependent Relationships Between Estimated LFPs and BOLD Responses in Humans; Journal of Neurophysiology. 2009. DOI : 10.1152/jn.90335.2008.
C. Honey; O. Sporns; L. Cammoun; X. Gigandet; J.-P. Thiran et al. : Predicting Human Resting-State Functional Connectivity from structural Connectivity; Proceedings of the National Academy of Sciences of the USA. 2009. DOI : 10.1073/pnas.0811168106.
S. Woodward; M. Schaer; D. Kaloupek; L. Cediel; S. Eliez : Smaller Global and Regional Cortical Volume in Combat-Related Posttraumatic Stress Disorder; Archives of General Psychiatry. 2009. DOI : 10.1001/archgenpsychiatry.2009.160.
S. Gorthi; V. Duay; N. Houhou; M. Bach Cuadra; U. Schick et al. : Segmentation of head and neck lymph node regions for radiotherapy planning, using active contour based atlas registration; IEEE Journal of selected topics in signal processing. 2009. DOI : 10.1109/JSTSP.2008.2011104.
M. Martin-Fernandez; E. Munoz-Moreno; L. Cammoun; J. P. Thiran; C. F. Westin et al. : Sequential Anisotropic Multichannel Wiener Filtering with Rician Bias Correction Applied to 3D Regularization of DWI Data; Medical Image Analysis. 2009. DOI : 10.1016/
L. Gui; J.-P. Thiran; N. Paragios : Cooperative Object Segmentation and Behavior Inference in Image Sequences; International Journal of Computer Vision. 2009. DOI : 10.1007/s11263-008-0146-4.
R. Cardenes; R. de Luis Garcia; M. Bach Cuadra : A Multimodal Evaluation Method for Medical Image Segmentation; Computerized Medical Imaging and Graphics. 2009. DOI : 10.1016/j.cmpb.2009.04.009.


C. R. Ruehl; P. Y. Chuang; A. Nenes : How quickly do cloud droplets form on atmospheric particles?; Atmospheric Chemistry and Physics. 2008. DOI : 10.5194/acp-8-1043-2008.
V. J. Wedeen; R. P. Wang; J. D. Schmahmann; T. Benner; W. Y. I. Tseng et al. : Diffusion spectrum magnetic resonance imaging (DSI) tractography of crossing fibers; Neuroimage. 2008. DOI : 10.1016/j.neuroimage.2008.03.036.
A. Masotti; A. Pitta; G. Ortaggi; M. Corti; C. Innocenti et al. : Synthesis and characterization of polyethylenimine-based iron oxide composites as novel contrast agents for MRI; Magma (New York, N.Y.). 2008. DOI : 10.1007/s10334-008-0147-x.
X. Gigandet; P. Hagmann; M. Kurant; L. Cammoun; R. Meuli et al. : Estimating the Confidence Level of White Matter Connections Obtained with MRI Tractography; PloS One. 2008.
F. Dufour; M. Schaer; M. Debbane; R. Farhoumand; B. Glaser et al. : Cingulate gyral reductions are related to low executive functioning and psychotic symptoms in 22q11.2 Deletion Syndrome; Neuropsychologia. 2008. DOI : 10.1016/j.neuropsychologia.2008.06.012.
S. Woodward; D. Kaloupek; M. Schaer; C. Martinez; S. Eliez : Right anterior cingulate cortical volume covaries with respiratory sinus arrythmia magnitude in combat veterans; Journal of Rehabilitation Research and Development. 2008. DOI : 10.1682/JRRD.2007.06.0082.
P. Hagmann; L. Cammoun; X. Gigandet; R. Meuli; C. J. Honey et al. : Mapping the Structural Core of Human Cerebral Cortex; PLOS Biology. 2008. DOI : 10.1371/journal.pbio.0060159.
V. Thirumalai; I. Tosic; P. Frossard : Symmetric Distributed Coding of Stereo Omnidirectional Images; Signal Processing: Image Communication. 2008. DOI : 10.1016/j.image.2008.04.005.
P. Besson; M. Kunt : Hypothesis testing for evaluating a multimodal pattern recognition framework applied to speaker detection; Journal of NeuroEngineering and Rehabilitation. 2008. DOI : 10.1186/1743-0003-5-11.
P. Besson; V. Popovici; J.-M. Vesin; J.-P. Thiran; M. Kunt : Extraction of audio features specific to speech production for multimodal speaker detection; IEEE Transactions on Multimedia. 2008. DOI : 10.1109/TMM.2007.911302.
M. Schaer; M. Bach Cuadra; L. Tamarit; F. Lazeyras; S. Eliez et al. : A Surface-based approach to Quantify Local Cortical Gyrification; IEEE Transactions on Medical Imaging. 2008. DOI : 10.1109/TMI.2007.903576.


S. Mhiri; L. Cammoun; F. Ghorbel : Speeding up HMRF_EM algorithm for fast unsupervised image segmentation by Bootstrap resampling: Application to the brain tissue segmentation; Signal Processing. 2007. DOI : 10.1016/j.sigpro.2007.04.010.
B. Glaser; M. Schaer; S. Berney; M. Debbane; P. Vuilleumier et al. : Structural changes to the fusiform gyrus: A cerebral marker for social impairments in 22q11.2 deletion syndrome?; Schizophrenia Research. 2007. DOI : 10.1016/j.schres.2007.08.016.
D. Zosso; M. Bach Cuadra; J.-P. Thiran : Direct Fourier Tomographic Reconstruction Image-To-Image Filter; The Insight Journal. 2007.
P. Hagmann; M. Kurant; X. Gigandet; P. Thiran; V. J. Wedeen et al. : Mapping Human Whole-Brain Structural Networks with Diffusion MRI; PLoS ONE. 2007. DOI : 10.1371/journal.pone.0000597.
A. Urakawa; F. Jutz; G. Laurenczy; A. Baiker : Carbon dioxide hydrogenation catalyzed by a ruthenium dihydride: a DFT and high-pressure spectroscopic investigation; Chemistry-A European Journal. 2007. DOI : 10.1002/chem.200601339.
C. Pollo; F. Vingerhoets; E. Pralong; J. Ghika; P. Maeder et al. : Localization of electrodes in the subthalamic nucleus on magnetic resonance imaging; J Neurosurg. 2007.
C. Daguenet; P. Dyson : A Metallacage Encapsulating Chloride as a Probe for a Solvation Scale in Ionic Liquids; Inorganic Chemistry. 2007. DOI : 10.1021/ic060631f.
J. Meynet; V. Popovici; J.-P. Thiran : Mixtures of Boosted Classifiers for Frontal Face Detection; Signal, Image and Video Processing. 2007. DOI : 10.1007/s11760-007-0003-x.
R. Martuzzi; M. Murray; C. Michel; J.-P. Thiran; P. Maeder et al. : Multisensory Interactions within Human Primary Cortices Revealed by BOLD Dynamics; Cerebral Cortex. 2007.
I. Bogdanova; X. Bresson; J.-P. Thiran; P. Vandergheynst : Scale-space analysis and active contours for omnidirectional images; IEEE Transactions on Image Processing. 2007. DOI : 10.1109/TIP.2007.899008.
J. Meynet; V. Popovici; J. Thiran : Face Detection with Boosted Gaussian Features; Pattern Recognition. 2007. DOI : 10.1016/j.patcog.2007.02.001.
L. Jonasson; X. Bresson; J. Thiran; V. Wedeen; P. Hagmann : Representing Diffusion MRI in 5D Simplifies Regularization and Segmentation of White Matter Tracts; IEEE Transactions on Medical Imaging. 2007.
X. Bresson; S. Esedoglu; P. Vandergheynst; J. Thiran; S. Osher : Fast Global Minimization of the Active Contour/Snake Model; Journal of Mathematical Imaging and Vision. 2007.
L. Jonasson; P. Hagmann; C. Pollo; X. Bresson; C. Richero Wilson et al. : A level set method for segmentation of the thalamus and its nuclei in DT-MRI; Signal Processing. 2007.


S. Gorthi; A. Mohanty; A. Chatterjee : Cantilever beam electrostatic MEMS actuators beyond pull-in; Journal of Micromechanics and MicroEngineering. 2006. DOI : 10.1088/0960-1317/16/9/007.
M. Debbane; M. Schaer; R. Farhoumand; B. Glaser; S. Eliez : Hippocampal volume reduction in 22q11.2 deletion syndrome; Neuropsychologia. 2006. DOI : 10.1016/j.neuropsychologia.2006.05.006.
M. Schaer; E. Schmitt; B. Glaser; F. Lazeyras; J. Delavelle et al. : Abnormal patterns of cortical gyrification in velo-cardio-facial syndrome (deletion 22q11.2): an MRI study; Psychiatry Research: Neuroimaging. 2006. DOI : 10.1016/j.pscychresns.2005.10.002.
S. Woodward; D. Kaloupek; C. Streeter; C. Martinez; M. Schaer et al. : Decreased anterior cingulate volume in combat-related PTSD; Biological Psychiatry. 2006. DOI : 10.1016/j.biopsych.2005.07.033.
P. Hagmann; L. Jonasson; T. Deffieux; R. Meuli; J.-P. Thiran et al. : Fibertract segmentation in position orientation space from high angular resolution diffusion MRI; Neuroimage. 2006. DOI : 10.1016/j.neuroimage.2006.02.043.
V. Thirumalai; R. Kanhirodan : Image Coding of 3D Volume Using Wavelet Transform for Fast Retrieval of 2D Images; IEE Proc. Vision, Image and Signal Processing. 2006.
F. Mendels; J.-P. Thiran; P. Vandergheynst : Matching pursuit-based shape representation and recognition using scale-space; International Journal of Imaging Systems and Technology. 2006.
D. Viceic; E. Fornari; J.-P. Thiran; P. Maeder; R. Meuli et al. : Human auditory belt areas specialized in sound recognition: a functional magnetic resonance imaging study; Neuroreport. 2006. DOI : 10.1097/01.wnr.0000239962.75943.dd.
P. Hagmann; L. Jonasson; P. Maeder; J.-P. Thiran; V. Wedeen et al. : Understanding Diffusion MR Imaging Techniques: From Scalar Diffusion-weighted Imaging to Diffusion Tensor Imaging and Beyond; Radiographics. 2006.
M. Bach Cuadra; L. Cammoun; T. Butz; O. Cuisenaire; J. Thiran : Correction to "Comparison and Validation of Tissue Modelization and Statistical Classification Methods in T1-Weighted MR Brain Images"; IEEE Transactions on Medical Imaging. 2006.
R. Martuzzi; M. Murray; P. Maeder; E. Fornari; J. Thiran et al. : Visuo-motor pathways in humans revealed by event-related fMRI; Experimental Brain Research. 2006. DOI : 10.1007/s00221-005-0232-6.
M. Bach Cuadra; M. De Craene; V. Duay; B. Macq; C. Pollo et al. : Dense Deformation Field Estimation for Atlas-based Segmentation of Pathological MR Brain Images; Computer Methods and Programs in Biomedicine. 2006.
P. Hagmann; L. Cammoun; R. Martuzzi; P. Maeder; S. Clarke et al. : Hand preference and sex shape the architecture of language networks; Human Brain Mapping. 2006. DOI : 10.1002/hbm.20224.
F. Sanchez Castro; C. Pollo; R. Meuli; P. Maeder; O. Cuisenaire et al. : A Cross Validation Study of Deep Brain Stimulation Targeting: From Experts to Atlas-Based, Segmentation-Based and Automatic Registration Algorithms; IEEE Transactions on Medical Imaging. 2006.
F. Sanchez Castro; C. Pollo; O. Cuisenaire; J. Villemure; J. Thiran : Validation of Experts Versus Atlas-Based and Automatic Registration Methods for Subthalamic Nucleus Targeting on MRI; International Journal of Computer Assisted Radiology and Surgery. 2006.
G. Jonasson; L. Jonasson; S. Kiliaridis : Changes in the radiographic characteristics of the mandibular alveolar process in dentate women with varying bone mineral density: A 5-years prospective study; Bone. 2006.
G. Antonini; J. Thiran : Counting pedestrians in video sequences using trajectory clustering; IEEE Transactions on Circuits and Systems for Video Technology. 2006. DOI : 10.1109/TCSVT.2006.879118.
X. Bresson; P. Vandergheynst; J. Thiran : Multiscale Active Contours; International Journal of Computer Vision. 2006. DOI : 10.1007/s11263-006-7462-3.
X. Bresson; P. Vandergheynst; J. Thiran : A Variational Model for Object Segmentation Using Boundary Information and Shape Prior Driven by the Mumford-Shah Functional; International Journal of Computer Vision. 2006.
G. Antonini; S. Venegas; M. Bierlaire; J.-P. Thiran : Behavioral priors for detection and tracking of pedestrians in video sequences; International Journal of Computer Vision. 2006. DOI : 10.1007/s11263-005-4797-0.


J. Haba-Rubio; A. Darbellay; F. Herrmann; J. Frey; A. Fernandes et al. : Obstructive sleep apnea syndrome: effect of respiratory events and arousal on pulse wave amplitude measured by photoplethysmography in NREM sleep; Sleep and Breathing. 2005.
M. Bach Cuadra; L. Cammoun; T. Butz; O. Cuisenaire; J. Thiran : Comparison and Validation of Tissue Modelization and Statistical Classification Methods in T1-weighted MR Brain Images; IEEE Transactions on Medical Imaging. 2005. DOI : 10.1109/TMI.2005.857652.
G. Devuyst; T. Karapanayiotides; M. Pusztaszeri; J. Lobrinus; L. Jonasson et al. : Ultrasound Measurement of the Fibrous Cap in Symptomatic and Asymptomatic Atheromatous Carotid Plaques; Circulation. 2005. DOI : 10.1161/CIRCULATIONAHA.104.483024.
T. Sinha; B. Dawant; V. Duay; D. Cash; R. Weil et al. : A method to track cortical surface deformations using a laser range scanner; IEEE Transactions on Medical Imaging. 2005.
T. Butz; J. Thiran : From Error Probability to Information Theoretic (Multi-Modal) Signal Processing; Signal Processing. 2005. DOI : 10.1016/j.sigpro.2004.11.027.
V. Popovici; S. Bengio; J. Thiran : Kernel Matching Pursuit for Large Datasets; Pattern Recognition. 2005. DOI : 10.1016/j.patcog.2005.01.021.
C. Pollo; M. Bach Cuadra; O. Cuisenaire; J. Villemure; J. Thiran : Segmentation of Brain Structures in Presence of a Space-Occupying Lesion; Neuroimage. 2005. DOI : 10.1016/j.neuroimage.2004.10.004.
L. Jonasson; X. Bresson; P. Hagmann; O. Cuisenaire; R. Meuli et al. : White matter fiber tract segmentation in DT-MRI using geometric flows; Medical Image Analysis. 2005. DOI : 10.1016/


O. Ecabert; J. Thiran : Adaptive Hough transform for the detection of natural shapes under weak affine transformations; Pattern Recognition Letters. 2004. DOI : 10.1016/j.patrec.2004.05.009.
V. Popovici; J. Thiran : Pattern Recognition using Higher-Order Local Autocorrelation Coefficients; Pattern Recognition Letters. 2004. DOI : 10.1016/j.patrec.2004.03.007.
M. Bach Cuadra; C. Pollo; A. Bardera; O. Cuisenaire; J. Villemure et al. : Atlas-based Segmentation of Pathological MR Brain Images using a Model of Lesion Growth; IEEE Transactions on Medical Imaging. 2004. DOI : 10.1109/TMI.2004.834618.
D. Chen; J.-M. Odobez; J.-P. Thiran : A Localization/Verification Scheme for Finding Text in Images and Video Frames Based on Contrast Independent Features and Machine Learning Methods; Signal Processing: Image Communication. 2004. DOI : 10.1016/S0923-5965(03)00075-4.


N. Meskhidze; W. L. Chameides; A. Nenes; G. Chen : Iron mobilization in mineral dust: Can anthropogenic SO2 emissions affect ocean productivity?; Geophysical Research Letters. 2003. DOI : 10.1029/2003GL018035.
M. Adriani; P. Maeder; R. Meuli; A. Bellmann; R. Frischknecht et al. : Sound recognition and localization in man: specialized cortical networks and effects of acute circumscribed lesions; Experimental Brain Research. 2003. DOI : 10.1007/s00221-003-1616-0.
M. Adriani; A. Bellmann; R. Meuli; E. Fornari; R. Frischknecht et al. : Unilateral hemispheric lesions disrupt parallel processing within the contralateral intact hemisphere: an auditory fMRI study; Neuroimage. 2003. DOI : 10.1016/j.neuroimage.2003.09.007.
P. Hagmann; J. Thiran; L. Jonasson; P. Vandergheynst; S. Clarke et al. : DTI mapping of human brain connectivity: statistical fibre tracking and virtual dissection; Neuroimage. 2003. DOI : 10.1016/S1053-8119(03)00142-3.
J. Meuwly; J. Thiran; F. Gudinchet : Application of Adaptive Image Processing Technique to Real-Time Spatial Compound Ultrasound Imaging Improves Image Quality; Investigative Radiology. 2003. DOI : 10.1097/00004424-200305000-00003.
P. Schmid-Saugeon; J. Guillod; J. Thiran : Towards a computer-aided diagnosis system for pigmented skin lesions; Computerized Medical Imaging and Graphics. 2003. DOI : 10.1016/S0895-6111(02)00048-4.
P. Salembier; J. Thiran; P. Vandergheynst; J. Vesin; M. Kunt : In Apologiam––rules of the game and plagiarism; Signal Processing. 2003. DOI : 10.1016/S0165-1684(02)00374-2.
A. Arakcheeva; G. Chapuis; H. Birkedal; P. Pattison; V. Grinevitch : The commensurate composite sigma-structure of beta-tantalum; Acta Crystallographica Section B-Structural Science. 2003.
G. Menegaz; J.-P. Thiran : 3D encoding/2D decoding of medical data; IEEE Transactions on Medical Imaging. 2003. DOI : 10.1109/TMI.2003.809689.


M. Wintermark; M. Reichhart; O. Cuisenaire; P. Maeder; J. Thiran et al. : Comparison of admission perfusion computed tomography and qualitative diffusion- and perfusion-weighted magnetic resonance imaging in acute stroke patients; Stroke. 2002. DOI : 10.1161/01.STR.0000023579.61630.AC.
M. Wintermark; M. Reichhart; J. Thiran; P. Maeder; K. Fellbaum et al. : Prognostic Value of Perfusion-CT Examinations in the Early Management of Acute Stroke Patients: a Comparison between Admission Perfusion-CT and Delayed Diffusion-MR; Annals of Neurology. 2002. DOI : 10.1002/ana.10136.
S. Clarke; A. Bellmann; P. Maeder; M. Adriani; O. Vernet et al. : What and where in human audition: selective deficits following focal hemispheric lesions; Experimental Brain Research. 2002. DOI : 10.1007/s00221-002-1203-9.
G. Menegaz; J.-P. Thiran : Lossy to lossless object-based coding of 3-D MRI data; IEEE Transactions on Image Processing. 2002. DOI : 10.1109/TIP.2002.802525.


M. Wintermark; P. Maeder; J. Thiran; P. Schnyder; R. Meuli : Quantitative Assessment of Regional Cerebral Blood Flows by Perfusion CT Studies at Low Injection Rates: A Critical Review of the Underlying Theoretical Models; European Radiol.. 2001.
M. Wintermark; J. Thiran; P. Maeder; P. Schnyder; R. Meuli : Simultaneous measurement of regional cerebral blood flow by perfusion CT and stable Xenon CT : A validation study; American Journal of Neuroradiology. 2001.
P. Maeder; R. Meuli; M. Adriani; A. Bellmann; E. Fornari et al. : Distinct pathways involved in sound recognition and localization: A human fMRI study; Neuroimage. 2001. DOI : 10.1006/nimg.2001.0888.


P. J. Dyson; B. F. G. Johnson; J. S. McIndoe; P. R. R. Langridge-Smith : Energy-dependent electrospray ionisation mass spectrometry: applications in transition metal carbonyl chemistry; Rapid Communications in Mass Spectrometry. 2000. DOI : 10.1002/(SICI)1097-0231(20000315)14:5<311::AID-RCM824>3.0.CO;2-H.
R. Meuli; P. Maeder; M. Adriani; A. Bellmann; E. Fornari et al. : Optimization of stimuli and acquisition technique for fMRI of the Auditory system; Neuroimage. 2000. DOI : 10.1016/S1053-8119(00)91472-1.
P. Maeder; R. Meuli; M. Adriani; E. Fornari; J. Thiran et al. : Passive and active tasks of sound recognition and localization: a human fMRI study; Neuroimage. 2000.
P. Maeder; R. Meuli; M. Adriani; A. Bellmann; E. Fornari et al. : Distinct pathways involved in sound recognition and localization: a human fMRI study; Neuroimage. 2000.
S. Clarke; P. Maeder; R. Meuli; M. Adriani; A. Bellmann et al. : What and where in human audition: Distinct cortical processing pathways revealed by fMRI; European Journal Neuroscience. 2000.
M. Wintermark; P. Maeder; F. Verdun; J. Thiran; J. Valley et al. : Using 80 kVp versus 120 kVp in Perfusion CT Measurement of Regional Cerebral Blood Flows; American Journal of Neuroradiology. 2000.


P. Schmid-Saugeon : Segmentation of digitized dermatoscopic images by 2-D colour clustering; IEEE Transactions on Medical Imaging. 1999. DOI : 10.1109/42.759124.
O. Cuisenaire; B. Macq : Fast Euclidean distance transformations by propagation using multiple neighbourhoods; Computer Vision and Image Understanding. 1999. DOI : 10.1006/cviu.1999.0783.


E. Neri; J. Thiran; B. Macq : Interactive DICOM image transmission and telediagnosis over the European ATM network; IEEE Transactions on Information Technology in Biomedicine. 1998. DOI : 10.1109/4233.678534.


S. Kash; R. Johnson; L. Tecott; J. Noebels; R. Mayfield et al. : Epilepsy in mice deficient in the 65-kDa isoform of glutamic acid decarboxylase; Proceedings of the National Academy of Sciences. 1997.
J. Thiran; V. Warscotte; B. Macq : A Queue-based Region Growing Algorithm for Accurate Segmentation of Multi-dimensional Digital Images; Signal Processing. 1997. DOI : 10.1016/S0165-1684(97)00060-1.
I. Mottet; R. Demeure; J. Rataud; M. Lucas; F. Wahl et al. : Effect of riluzole on the evolution of foca cerebral ischemia: a magnetic resonance imaging study; MAGN RESON MATER PHY. 1997.
B. Van Beers; J. Goudemant; A. Oksendal; J. Jamart; M. Delos et al. : Detection of Reperfused Ischemia of Rat Intestine: Value of Magnetic Resonance Imaging with Small-molecular-weight Dysprosium and Gadolinium Chelates; Acad. Radiol.. 1997.


J. Thiran; B. Macq : Morphological Feature Extraction for the Classification of Digital Images of Cancerous Tissues; IEEE Transactions on Biomedical Engineering. 1996. DOI : 10.1109/10.536902.


V. Warscotte; J. Thiran; B. Macq; C. Michel : Accurate Segmentation of 3D MRI of the Head using a new Directional Watershed Transform; European Journal of Nuclear Medicine. 1995.
C. Michel; M. Sibomana; A. Coppens; A. Bol; A. De Volder et al. : Interactive delineation of brain sulcii and their merging into functional PET images; European Journal of Nuclear Medicine. 1995.


A. Bertholds; R. Dändliker : Deformation of single-mode optical fibers under static longitudinal stress; Journal of Lightwave Technology. 1987. DOI : 10.1109/JLT.1987.1075583.

V. Kartik; A. Dabbech; J.-P. Thiran; Y. Wiaux : Robust dimensionality reduction for interferometric imaging of Cygnus A; Monthly Notices of the Royal Astronomical Society.
G. L. Cuendet; C. R. J. Ecabert; M. Zimmermann; H. K. Ekenel; J.-P. Thiran : 3D Spectral Nonrigid Registration of Facial Expression Scans; IEEE Transactions on Visualization and Computer Graphics.



A. M. Studerus-Germann; J.-P. Thiran; A. Daducci; O. P. Gautschi : Diagnostic approaches to predict persistent post-traumatic symptoms after mild traumatic brain injury - a literature review; International Journal Of Neuroscience. 2016. DOI : 10.3109/00207454.2015.1033620.


A. E. Vanrossomme; O. F. Eker; J. -P. Thiran; G. P. Courbebaisse; K. Z. Boudjeltia : Intracranial Aneurysms: Wall Motion Analysis for Prediction of Rupture; American Journal Of Neuroradiology. 2015. DOI : 10.3174/ajnr.A4310.


D. Gothelf; M. Schaer; S. Eliez : Genes, Brain Development and Psychiatric Phenotypes in Velo-Cardio-Facial Syndrome; Mental Retardation & Developmental Disabilities Research Reviews. 2008. DOI : 10.1002/ddrr.9.


M. Schaer; S. Eliez : From genes to brain: understanding brain development in neurogenetic disorders using neuroimaging techniques; Child and Adolescent Psychiatric Clinics of North America. 2007.